CDS

Accession Number TCMCG066C01057
gbkey CDS
Protein Id XP_034597887.1
Location join(8093970..8094133,8094212..8094269,8094701..8095114,8095262..8095432,8095522..8095652,8095746..8096118,8096203..8096334,8096977..8097063,8097137..8097258,8097725..8097845,8097922..8098073,8098146..8098281,8099182..8099305,8099381..8099451,8099536..8099604,8099688..8099807,8099883..8100041,8100129..8100209,8100339..8100503,8100625..8100680,8101589..8101688,8101781..8101875,8101949..8102026,8102144..8102582)
Gene LOC117858850
GeneID 117858850
Organism Setaria viridis

Protein

Length 1205aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA633601
db_source XM_034741996.1
Definition ATP-dependent DNA helicase Q-like 4A [Setaria viridis]

EGGNOG-MAPPER Annotation

COG_category A
Description DEAD/DEAH box helicase
KEGG_TC -
KEGG_Module M00295        [VIEW IN KEGG]
M00414        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03032        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K03654        [VIEW IN KEGG]
ko:K10901        [VIEW IN KEGG]
EC 3.6.4.12        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko03018        [VIEW IN KEGG]
ko03440        [VIEW IN KEGG]
ko03460        [VIEW IN KEGG]
map03018        [VIEW IN KEGG]
map03440        [VIEW IN KEGG]
map03460        [VIEW IN KEGG]
GOs GO:0000724        [VIEW IN EMBL-EBI]
GO:0000725        [VIEW IN EMBL-EBI]
GO:0001101        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003678        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004003        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006302        [VIEW IN EMBL-EBI]
GO:0006310        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008026        [VIEW IN EMBL-EBI]
GO:0008094        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009266        [VIEW IN EMBL-EBI]
GO:0009378        [VIEW IN EMBL-EBI]
GO:0009409        [VIEW IN EMBL-EBI]
GO:0009506        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009737        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0032392        [VIEW IN EMBL-EBI]
GO:0032508        [VIEW IN EMBL-EBI]
GO:0032870        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0033993        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043138        [VIEW IN EMBL-EBI]
GO:0043140        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055044        [VIEW IN EMBL-EBI]
GO:0070035        [VIEW IN EMBL-EBI]
GO:0070417        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0071103        [VIEW IN EMBL-EBI]
GO:0071215        [VIEW IN EMBL-EBI]
GO:0071229        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071396        [VIEW IN EMBL-EBI]
GO:0071495        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097305        [VIEW IN EMBL-EBI]
GO:0097306        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1901701        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCAAGCCAATAACAATCCACCAAGGGTCAACTGGCAGCATCATGCAAATGCTATTGAAGGCTCCTCTAGCAAAGATGACTTTCTGAGTTCAAGCTTTCTGTTCTCTTTGCCAACTCAAAGGCCTAACCCAGAAGCAAACCGCGAGGGGATGCTTTCTCTAAGGTCCTCTGCTTGTAAAATTCAAGGCACAGAGCGTCTTCAAGTTCCGTGGATTGAGAAGGCCTGGCGTTCTCTATGCAACACTCAGGTTGCCTGCAGGAGCTATTTAAGACCTGGTTTATCTGCAAAAGTGAAAGACTGCGATAAGGGTCATGCTCGCATTTATGGAGAAGGCTCATATAACATTAACAAGATGGAAACTGTGCCAGGAAATAGGATTCTCTCTCAGGAAAGCACGCACCGACCCTGTGAAAGTGGTTCTGTGGAGAACAATAGCATCCATCAGCCTACTGGCATTGACTCCTCTACAAGGACTTACCAGAGCAACCATGTGGTGCAGACAGATATAATGAGAGCAAGAAATCAGTACAATTATGTAAGAACCGATGCTGGACTACACCAGGCTGCTCCAGTTGCTGATAGCATGTGCACTGATGATAAATTAGATGCCATGGATGATGATGATATTCTGGCGAGTATTGATGTGGACCGAATAGTTATGGAACATTATCAAGCAATGAATACACCCAGAGGATCCGCATCCCAAAACACGTCAACTCCACCAGGAAACAAGTGTAATTTCAATGGCATCGATGAGACCAATTTACCACAAGAACTCTCTGAATTATGTAACCATCAGTGCAAGTTAGCTTTTTGCCCAAAGGCAATGGATCACTTGCAGGAGATGAAGAATGAGATGATTGCAGTAGCCGATGAGCTTCTTGATGATGATGGTAAACTCAACCTTCAACGTTCCGAAGAGCTTCGTAAAAAACGATTGCATCTTAAGAAGCAGATTCAGCTACTCGAGGAGTATATGGCAAGGTCTTCCCAGGATGAAGAGAGACAGAGATCACACTCTATGGCATCCACAGCAGCTATACAGGGGCATCTCCCACCTATGACCCCCGGAAGCACTTTTATGATGGATAGCAGTAGGTTCCAGTCTCAGGTTTACATCAGAAATGGGCCTGGGAATAGTGATTTATGCTATTCTCCCGCTCCATATTCCTGTTCAGATAATCTAAGCATGCCATTACATTCTGTATGGAGAGAATATACCCCGAAGGTTATCGATACCAACTACACTGAAGGTTCTGCTGATAAAAGATGGAGTAGTACTAATTTCCCATGGACTAAGGAACTTGAGGCCAAGAACAGAAATAAGTTTGGAAACCGTTCTTTCCGTCCAAACCAGCGAGAAGTAATCAATGCCACAATGAGTGGGAATGATGTTTTTGTTTTGATGCCAACTGGTGGTGGGAAAAGTTTGACATATCAGCTTCCAGCACTTATTAGTGAGGGCTTAACGTTAGTAGTTTGCCCTCTTGTCTCACTCATCCAAGACCAGATCATGCACTTGTCACAGGCAAATATTCCTGCAACTTATCTGAGTGCCAGCATGGAATGGCCTGAACAGCAAGAGATCTTAAGAGGCTTAATGTCATGCCACTACAAGTTGTTGTACGTCACTCCAGAGAAAATAGCTAAGAGTAATTCACTGACGGGACTATTGGATAATTTATATTCACAAGGGCATCTTTCTAGAATTGTTATTGATGAAGCTCATTGTGTAAGCCAATGGGGTCATGACTTCCGACCTGATTACAAGAACTTAGGTGTTCTAAAACAAAATTTCCCCAAGACACCAGTCCTGGCCTTGACTGCAACAGCAACTGCTAGGGTTAAGGAAGATGTCGTGCAAGCTTTAGGCCTTGCAAACTGCATTGTTTTCAGACAAAGTTTTAATCGTCCAAATCTAAGGTACCTCTTAAGGCCCAAGACAAAGAAATGCCTTGAGGACATTGATAACTTTATCCGCACAAATCATTTTAAAGAATGTGGCATCATATACTGCCTTTCAAGAATGGATTGTGAAAAAGTGGCAGAAAAACTAAGGGAATGTGGACACAGTGTATCACACTACCATGGTAGCATGGATCCTGTGGATAGAACACGTGTACAGAAGCAATGGAGTAAGGATAAGATCAACATAATCTGTGCTACAGTTGCATTTGGCATGGGTATCAATAAACCTGATGTTCGCTTTGTTATTCATCATTCGCTGCCCAAGTCAATTGAAGGATATCATCAGGAGTGTGGACGTGCTGGGAGAGATGGGCTACCTTCCTCTTGTTTGTTGTATTACCAGTATTCTGACTATATTCGGGTCAGACACATGCTTACACAAGGAGTTGCCGAGCAAACAGCACCACCACGTGGAAGCTATTCAAATTCAAATGAGCAAGCACTTAAGACACACAAGGAGAATCTCCTGCACATGGTCAGTTACTGTGAAAACGATGTGGATTGCAGACGCCTACTTCAACTGATCCATTTTGGGGAGATGTTTGATCCTTCATGTTGTGCAAAAACCTGTGATAACTGCTTGAAAGAGTTGACATGGGTCGAGAAAGATGTCACCAATATTGCTAGGCAGATGGTTGAGCTGGTCACAATGACAGGGCAGTCACATTCATCTTCTCACATTCTTGAAGTTTACAGAGGGTCTGTGAGCCAAAATGTCAAGAAGCAGCGTCATGATGCTTTACCTCTTCATGGAGCTGGGAAGCATCTAGCTAAAGGTGATGCAGCAAGGATAATGCGACATTTAGTAACTGAGGGAATACTTATTGAGGATGTGAAAAAGAGTGACAACATATACGGATCAATATCATCTGTACTAAAGGCTAATCATTCAAAAGCTAATGAGCTTCGCTCTGGCAAACACAGCATTGTCCTGAAGTTCCCTGCTCCTGATAAGGCCTCCAAGATGGGGAAACTTGATGCATCATTATTTCCACAAATCAATAAGACCGTTCAGCAACAAAGTGAAGTTGATGAGAACCTTTCATCGATGCTCTTCGATGCTTTACTTAGCCTTAGGGAACAGATAATGGATGAGTGTAATGAAGGATACCATGCGTACCACATATTCAAGAAGGACTCGCTGAAGGAAATGAGCATCCGAGTACCAAGGACAAAAGAAGAGCTCTTGGAGATAAACGGCATCGGCAAGGCAAAGGTCAAGAAGTACGGGGACCGTGTGCTGGCAACCATCGAGGACTTCCTCAGCAAACACCCAAATCCAAGGAGAAACAGCAGCGGCAGCGGCAGCAACGAGCACACCGAGGCCAAGAAGCGAAGAGGCTTCACTGCCAGCTACGCTGGAAGCATCGCCGACGATGACTTCGAAGAGCGCACGGCTCAGTCCAAGAAGCGCGCGGCGAAGACGCGGAGCACCAAGCAGGGGGTATCTGACGCCACGAGCATGGTCCACGGCGCCCGCTGTATGGACGCTGATCTGGATGGAGTTGAGGTGTTGGACGACGAGCTGTGCAGCATTCAGAAGCCCGTGGCTTCTGGCAGGGTTCTGCCGAAGTGGGCGCCGGCCAAAGCCAAGGGCAGCAGCGTTCCTCCTTCTAACTTATTCCAAGAATTTGGATACGTGAAGTAA
Protein:  
MQANNNPPRVNWQHHANAIEGSSSKDDFLSSSFLFSLPTQRPNPEANREGMLSLRSSACKIQGTERLQVPWIEKAWRSLCNTQVACRSYLRPGLSAKVKDCDKGHARIYGEGSYNINKMETVPGNRILSQESTHRPCESGSVENNSIHQPTGIDSSTRTYQSNHVVQTDIMRARNQYNYVRTDAGLHQAAPVADSMCTDDKLDAMDDDDILASIDVDRIVMEHYQAMNTPRGSASQNTSTPPGNKCNFNGIDETNLPQELSELCNHQCKLAFCPKAMDHLQEMKNEMIAVADELLDDDGKLNLQRSEELRKKRLHLKKQIQLLEEYMARSSQDEERQRSHSMASTAAIQGHLPPMTPGSTFMMDSSRFQSQVYIRNGPGNSDLCYSPAPYSCSDNLSMPLHSVWREYTPKVIDTNYTEGSADKRWSSTNFPWTKELEAKNRNKFGNRSFRPNQREVINATMSGNDVFVLMPTGGGKSLTYQLPALISEGLTLVVCPLVSLIQDQIMHLSQANIPATYLSASMEWPEQQEILRGLMSCHYKLLYVTPEKIAKSNSLTGLLDNLYSQGHLSRIVIDEAHCVSQWGHDFRPDYKNLGVLKQNFPKTPVLALTATATARVKEDVVQALGLANCIVFRQSFNRPNLRYLLRPKTKKCLEDIDNFIRTNHFKECGIIYCLSRMDCEKVAEKLRECGHSVSHYHGSMDPVDRTRVQKQWSKDKINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGLPSSCLLYYQYSDYIRVRHMLTQGVAEQTAPPRGSYSNSNEQALKTHKENLLHMVSYCENDVDCRRLLQLIHFGEMFDPSCCAKTCDNCLKELTWVEKDVTNIARQMVELVTMTGQSHSSSHILEVYRGSVSQNVKKQRHDALPLHGAGKHLAKGDAARIMRHLVTEGILIEDVKKSDNIYGSISSVLKANHSKANELRSGKHSIVLKFPAPDKASKMGKLDASLFPQINKTVQQQSEVDENLSSMLFDALLSLREQIMDECNEGYHAYHIFKKDSLKEMSIRVPRTKEELLEINGIGKAKVKKYGDRVLATIEDFLSKHPNPRRNSSGSGSNEHTEAKKRRGFTASYAGSIADDDFEERTAQSKKRAAKTRSTKQGVSDATSMVHGARCMDADLDGVEVLDDELCSIQKPVASGRVLPKWAPAKAKGSSVPPSNLFQEFGYVK